Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp3P28862 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp3P28862 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.83■□□□□ 0.76
Mmp3P28862 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp3P28862 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.82■□□□□ 0.76
Mmp3P28862 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Mmp3P28862 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Mmp3P28862 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp3P28862 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp3P28862 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp3P28862 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Mmp3P28862 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.82■□□□□ 0.76
Mmp3P28862 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp3P28862 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp3P28862 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp3P28862 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp3P28862 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp3P28862 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp3P28862 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp3P28862 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp3P28862 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp3P28862 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp3P28862 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Mmp3P28862 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.81■□□□□ 0.76
Mmp3P28862 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.81■□□□□ 0.76
Mmp3P28862 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.81■□□□□ 0.76
Mmp3P28862 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp3P28862 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp3P28862 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Mmp3P28862 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp3P28862 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp3P28862 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.8■□□□□ 0.76
Mmp3P28862 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp3P28862 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp3P28862 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Mmp3P28862 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Mmp3P28862 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.8■□□□□ 0.76
Mmp3P28862 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.8■□□□□ 0.76
Mmp3P28862 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp3P28862 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp3P28862 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp3P28862 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp3P28862 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp3P28862 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp3P28862 Gm15378-201ENSMUST00000121894 207 ntBASIC19.79■□□□□ 0.76
Mmp3P28862 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp3P28862 Gm6576-201ENSMUST00000169678 883 ntBASIC19.79■□□□□ 0.76
Mmp3P28862 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Mmp3P28862 Mir6982-201ENSMUST00000184354 68 ntBASIC19.79■□□□□ 0.76
Mmp3P28862 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.79■□□□□ 0.76
Mmp3P28862 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.79■□□□□ 0.76
Mmp3P28862 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp3P28862 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp3P28862 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp3P28862 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp3P28862 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp3P28862 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp3P28862 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp3P28862 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Mmp3P28862 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp3P28862 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp3P28862 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp3P28862 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.78■□□□□ 0.76
Mmp3P28862 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp3P28862 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Mmp3P28862 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Mmp3P28862 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp3P28862 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp3P28862 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.77■□□□□ 0.76
Mmp3P28862 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Mmp3P28862 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp3P28862 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.77■□□□□ 0.76
Mmp3P28862 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.77■□□□□ 0.76
Mmp3P28862 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.77■□□□□ 0.76
Mmp3P28862 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.77■□□□□ 0.76
Mmp3P28862 Mtag2-201ENSMUST00000058665 714 ntBASIC19.77■□□□□ 0.76
Mmp3P28862 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp3P28862 Zfp783-201ENSMUST00000095946 670 ntBASIC19.77■□□□□ 0.76
Mmp3P28862 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Mmp3P28862 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp3P28862 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Mmp3P28862 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp3P28862 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.76■□□□□ 0.75
Mmp3P28862 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp3P28862 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp3P28862 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp3P28862 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.76■□□□□ 0.75
Mmp3P28862 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp3P28862 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp3P28862 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp3P28862 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp3P28862 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Mmp3P28862 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Mmp3P28862 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp3P28862 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.75■□□□□ 0.75
Mmp3P28862 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.75■□□□□ 0.75
Mmp3P28862 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.75■□□□□ 0.75
Mmp3P28862 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.75■□□□□ 0.75
Mmp3P28862 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Mmp3P28862 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms