Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nckap1P28660 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nckap1P28660 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nckap1P28660 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nckap1P28660 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Nckap1P28660 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.36■□□□□ 0.53
Nckap1P28660 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nckap1P28660 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nckap1P28660 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nckap1P28660 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nckap1P28660 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nckap1P28660 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nckap1P28660 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nckap1P28660 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nckap1P28660 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Nckap1P28660 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nckap1P28660 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nckap1P28660 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nckap1P28660 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nckap1P28660 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nckap1P28660 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nckap1P28660 Gm2399-201ENSMUST00000104944 225 ntBASIC18.35■□□□□ 0.53
Nckap1P28660 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nckap1P28660 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nckap1P28660 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nckap1P28660 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nckap1P28660 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nckap1P28660 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nckap1P28660 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nckap1P28660 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nckap1P28660 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nckap1P28660 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nckap1P28660 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nckap1P28660 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nckap1P28660 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nckap1P28660 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nckap1P28660 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Nckap1P28660 Gm11249-201ENSMUST00000117071 859 ntBASIC18.34■□□□□ 0.53
Nckap1P28660 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.34■□□□□ 0.53
Nckap1P28660 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nckap1P28660 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.34■□□□□ 0.53
Nckap1P28660 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nckap1P28660 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.34■□□□□ 0.53
Nckap1P28660 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.34■□□□□ 0.53
Nckap1P28660 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Nckap1P28660 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.34■□□□□ 0.53
Nckap1P28660 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nckap1P28660 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nckap1P28660 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nckap1P28660 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nckap1P28660 Golph3-202ENSMUST00000226517 2359 ntBASIC18.34■□□□□ 0.53
Nckap1P28660 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nckap1P28660 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nckap1P28660 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nckap1P28660 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nckap1P28660 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nckap1P28660 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nckap1P28660 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nckap1P28660 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.33■□□□□ 0.52
Nckap1P28660 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.33■□□□□ 0.52
Nckap1P28660 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nckap1P28660 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nckap1P28660 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Nckap1P28660 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nckap1P28660 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nckap1P28660 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nckap1P28660 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nckap1P28660 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nckap1P28660 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nckap1P28660 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.32■□□□□ 0.52
Nckap1P28660 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nckap1P28660 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.32■□□□□ 0.52
Nckap1P28660 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nckap1P28660 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nckap1P28660 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Nckap1P28660 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nckap1P28660 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.32■□□□□ 0.52
Nckap1P28660 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nckap1P28660 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.32■□□□□ 0.52
Nckap1P28660 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nckap1P28660 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nckap1P28660 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nckap1P28660 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nckap1P28660 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nckap1P28660 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nckap1P28660 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Nckap1P28660 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nckap1P28660 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nckap1P28660 Gm6576-201ENSMUST00000169678 883 ntBASIC18.31■□□□□ 0.52
Nckap1P28660 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.31■□□□□ 0.52
Nckap1P28660 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Nckap1P28660 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nckap1P28660 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nckap1P28660 Flg-201ENSMUST00000050758 1488 ntBASIC18.31■□□□□ 0.52
Nckap1P28660 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nckap1P28660 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nckap1P28660 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nckap1P28660 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.3■□□□□ 0.52
Nckap1P28660 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nckap1P28660 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms