Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl6P27784 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl6P27784 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl6P27784 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl6P27784 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.38□□□□□ -0.11
Ccl6P27784 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl6P27784 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl6P27784 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl6P27784 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.38□□□□□ -0.11
Ccl6P27784 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl6P27784 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl6P27784 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl6P27784 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccl6P27784 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl6P27784 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl6P27784 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Ccl6P27784 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccl6P27784 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Ccl6P27784 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.38□□□□□ -0.11
Ccl6P27784 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.38□□□□□ -0.11
Ccl6P27784 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.38□□□□□ -0.11
Ccl6P27784 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccl6P27784 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.38□□□□□ -0.11
Ccl6P27784 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl6P27784 Gm10493-201ENSMUST00000097270 612 ntBASIC14.38□□□□□ -0.11
Ccl6P27784 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccl6P27784 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl6P27784 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl6P27784 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Ccl6P27784 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl6P27784 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl6P27784 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.37□□□□□ -0.11
Ccl6P27784 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.37□□□□□ -0.11
Ccl6P27784 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Ccl6P27784 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccl6P27784 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccl6P27784 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl6P27784 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl6P27784 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl6P27784 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccl6P27784 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl6P27784 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl6P27784 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccl6P27784 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl6P27784 Gm13234-201ENSMUST00000120010 747 ntBASIC14.36□□□□□ -0.11
Ccl6P27784 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl6P27784 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccl6P27784 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.36□□□□□ -0.11
Ccl6P27784 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccl6P27784 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl6P27784 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccl6P27784 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccl6P27784 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccl6P27784 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl6P27784 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl6P27784 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl6P27784 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl6P27784 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccl6P27784 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.36□□□□□ -0.11
Ccl6P27784 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccl6P27784 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.35□□□□□ -0.11
Ccl6P27784 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccl6P27784 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Gm5874-201ENSMUST00000096101 508 ntBASIC14.35□□□□□ -0.11
Ccl6P27784 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ccl6P27784 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
Ccl6P27784 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccl6P27784 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccl6P27784 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl6P27784 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl6P27784 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms