Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm13146-201ENSMUST00000118508 780 ntBASIC16.97■□□□□ 0.31
Cd40lgP27548 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.97■□□□□ 0.31
Cd40lgP27548 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.97■□□□□ 0.31
Cd40lgP27548 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40lgP27548 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cd40lgP27548 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40lgP27548 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Cd40lgP27548 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40lgP27548 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Cd40lgP27548 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd40lgP27548 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.97■□□□□ 0.31
Cd40lgP27548 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40lgP27548 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Cd40lgP27548 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cd40lgP27548 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.96■□□□□ 0.31
Cd40lgP27548 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40lgP27548 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40lgP27548 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40lgP27548 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.96■□□□□ 0.31
Cd40lgP27548 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cd40lgP27548 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40lgP27548 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cd40lgP27548 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Cd40lgP27548 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cd40lgP27548 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cd40lgP27548 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cd40lgP27548 Gm37179-201ENSMUST00000194862 823 ntBASIC16.95■□□□□ 0.3
Cd40lgP27548 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd40lgP27548 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.94■□□□□ 0.3
Cd40lgP27548 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Gm10602-201ENSMUST00000098239 609 ntBASIC16.94■□□□□ 0.3
Cd40lgP27548 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cd40lgP27548 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cd40lgP27548 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cd40lgP27548 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40lgP27548 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40lgP27548 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.93■□□□□ 0.3
Cd40lgP27548 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.93■□□□□ 0.3
Cd40lgP27548 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cd40lgP27548 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Cd40lgP27548 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.93■□□□□ 0.3
Cd40lgP27548 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cd40lgP27548 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.93■□□□□ 0.3
Cd40lgP27548 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd40lgP27548 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cd40lgP27548 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40lgP27548 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cd40lgP27548 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40lgP27548 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40lgP27548 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40lgP27548 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40lgP27548 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.92■□□□□ 0.3
Cd40lgP27548 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40lgP27548 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40lgP27548 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40lgP27548 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cd40lgP27548 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40lgP27548 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40lgP27548 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cd40lgP27548 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40lgP27548 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40lgP27548 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cd40lgP27548 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.91■□□□□ 0.3
Cd40lgP27548 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.91■□□□□ 0.3
Cd40lgP27548 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40lgP27548 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cd40lgP27548 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40lgP27548 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40lgP27548 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.91■□□□□ 0.3
Cd40lgP27548 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms