Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxd8P23463 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxd8P23463 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Hoxd8P23463 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxd8P23463 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxd8P23463 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxd8P23463 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.16■□□□□ 0.66
Hoxd8P23463 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxd8P23463 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hoxd8P23463 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.16■□□□□ 0.66
Hoxd8P23463 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.16■□□□□ 0.66
Hoxd8P23463 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.16■□□□□ 0.66
Hoxd8P23463 Gm43183-201ENSMUST00000200632 547 ntBASIC19.16■□□□□ 0.66
Hoxd8P23463 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hoxd8P23463 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxd8P23463 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxd8P23463 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxd8P23463 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxd8P23463 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxd8P23463 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Hoxd8P23463 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxd8P23463 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxd8P23463 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hoxd8P23463 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.15■□□□□ 0.66
Hoxd8P23463 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.15■□□□□ 0.66
Hoxd8P23463 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxd8P23463 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.15■□□□□ 0.66
Hoxd8P23463 Gm15565-201ENSMUST00000118890 427 ntBASIC19.15■□□□□ 0.66
Hoxd8P23463 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.15■□□□□ 0.66
Hoxd8P23463 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxd8P23463 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Hoxd8P23463 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hoxd8P23463 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Hoxd8P23463 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxd8P23463 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxd8P23463 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Hoxd8P23463 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.14■□□□□ 0.65
Hoxd8P23463 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxd8P23463 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.14■□□□□ 0.65
Hoxd8P23463 Mir6349-201ENSMUST00000184059 97 ntBASIC19.14■□□□□ 0.65
Hoxd8P23463 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxd8P23463 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Hoxd8P23463 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxd8P23463 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxd8P23463 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxd8P23463 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxd8P23463 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxd8P23463 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Hoxd8P23463 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxd8P23463 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.13■□□□□ 0.65
Hoxd8P23463 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.13■□□□□ 0.65
Hoxd8P23463 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.13■□□□□ 0.65
Hoxd8P23463 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Hoxd8P23463 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxd8P23463 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxd8P23463 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hoxd8P23463 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.13■□□□□ 0.65
Hoxd8P23463 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxd8P23463 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxd8P23463 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxd8P23463 Gm21814-202ENSMUST00000203277 873 ntBASIC19.12■□□□□ 0.65
Hoxd8P23463 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxd8P23463 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxd8P23463 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxd8P23463 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxd8P23463 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.12■□□□□ 0.65
Hoxd8P23463 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxd8P23463 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Hoxd8P23463 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.12■□□□□ 0.65
Hoxd8P23463 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Hoxd8P23463 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxd8P23463 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxd8P23463 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxd8P23463 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.11■□□□□ 0.65
Hoxd8P23463 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxd8P23463 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxd8P23463 Gm37292-201ENSMUST00000192062 758 ntBASIC19.11■□□□□ 0.65
Hoxd8P23463 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Hoxd8P23463 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Hoxd8P23463 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxd8P23463 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxd8P23463 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxd8P23463 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxd8P23463 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxd8P23463 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
Hoxd8P23463 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxd8P23463 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxd8P23463 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Hoxd8P23463 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxd8P23463 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Hoxd8P23463 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxd8P23463 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.1■□□□□ 0.65
Hoxd8P23463 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxd8P23463 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxd8P23463 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Hoxd8P23463 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxd8P23463 Gm42545-201ENSMUST00000202755 922 ntBASIC19.1■□□□□ 0.65
Hoxd8P23463 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxd8P23463 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxd8P23463 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms