Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.81■□□□□ 0.6
VimP20152 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VimP20152 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
VimP20152 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VimP20152 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VimP20152 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VimP20152 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VimP20152 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VimP20152 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.8■□□□□ 0.6
VimP20152 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VimP20152 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.8■□□□□ 0.6
VimP20152 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VimP20152 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VimP20152 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VimP20152 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VimP20152 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.8■□□□□ 0.6
VimP20152 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
VimP20152 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.8■□□□□ 0.6
VimP20152 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VimP20152 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VimP20152 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VimP20152 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VimP20152 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VimP20152 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VimP20152 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VimP20152 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VimP20152 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.79■□□□□ 0.6
VimP20152 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VimP20152 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VimP20152 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VimP20152 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VimP20152 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VimP20152 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VimP20152 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VimP20152 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VimP20152 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VimP20152 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VimP20152 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VimP20152 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VimP20152 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VimP20152 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VimP20152 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VimP20152 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VimP20152 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VimP20152 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VimP20152 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.78■□□□□ 0.6
VimP20152 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VimP20152 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.78■□□□□ 0.6
VimP20152 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VimP20152 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VimP20152 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VimP20152 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
VimP20152 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VimP20152 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VimP20152 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
VimP20152 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
VimP20152 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.77■□□□□ 0.6
VimP20152 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VimP20152 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VimP20152 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VimP20152 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.77■□□□□ 0.59
VimP20152 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.77■□□□□ 0.59
VimP20152 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VimP20152 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.76■□□□□ 0.59
VimP20152 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VimP20152 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.76■□□□□ 0.59
VimP20152 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
VimP20152 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VimP20152 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VimP20152 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VimP20152 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.75■□□□□ 0.59
VimP20152 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VimP20152 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VimP20152 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VimP20152 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VimP20152 Gm11175-201ENSMUST00000116172 543 ntBASIC18.75■□□□□ 0.59
VimP20152 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.75■□□□□ 0.59
VimP20152 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.75■□□□□ 0.59
VimP20152 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VimP20152 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VimP20152 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VimP20152 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.74■□□□□ 0.59
VimP20152 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VimP20152 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.74■□□□□ 0.59
VimP20152 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VimP20152 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VimP20152 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms