Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Sod1P08228 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.47■□□□□ 0.39
Sod1P08228 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sod1P08228 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sod1P08228 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.46■□□□□ 0.39
Sod1P08228 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sod1P08228 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sod1P08228 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sod1P08228 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sod1P08228 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Sod1P08228 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sod1P08228 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sod1P08228 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sod1P08228 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.46■□□□□ 0.38
Sod1P08228 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Sod1P08228 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sod1P08228 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sod1P08228 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sod1P08228 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sod1P08228 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sod1P08228 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sod1P08228 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Sod1P08228 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.45■□□□□ 0.38
Sod1P08228 Gm42545-201ENSMUST00000202755 922 ntBASIC17.45■□□□□ 0.38
Sod1P08228 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sod1P08228 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sod1P08228 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sod1P08228 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sod1P08228 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sod1P08228 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sod1P08228 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sod1P08228 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sod1P08228 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sod1P08228 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.44■□□□□ 0.38
Sod1P08228 Gm37292-201ENSMUST00000192062 758 ntBASIC17.44■□□□□ 0.38
Sod1P08228 Gm43799-201ENSMUST00000201845 579 ntBASIC17.44■□□□□ 0.38
Sod1P08228 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.44■□□□□ 0.38
Sod1P08228 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.44■□□□□ 0.38
Sod1P08228 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.44■□□□□ 0.38
Sod1P08228 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sod1P08228 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sod1P08228 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.44■□□□□ 0.38
Sod1P08228 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.44■□□□□ 0.38
Sod1P08228 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sod1P08228 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sod1P08228 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sod1P08228 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sod1P08228 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sod1P08228 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sod1P08228 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sod1P08228 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sod1P08228 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sod1P08228 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.43■□□□□ 0.38
Sod1P08228 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Sod1P08228 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sod1P08228 Gm6433-201ENSMUST00000118634 875 ntBASIC17.43■□□□□ 0.38
Sod1P08228 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.43■□□□□ 0.38
Sod1P08228 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sod1P08228 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.43■□□□□ 0.38
Sod1P08228 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.43■□□□□ 0.38
Sod1P08228 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sod1P08228 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sod1P08228 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sod1P08228 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sod1P08228 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sod1P08228 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sod1P08228 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sod1P08228 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sod1P08228 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sod1P08228 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sod1P08228 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sod1P08228 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sod1P08228 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.42■□□□□ 0.38
Sod1P08228 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sod1P08228 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sod1P08228 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Sod1P08228 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sod1P08228 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.41■□□□□ 0.38
Sod1P08228 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sod1P08228 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sod1P08228 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.41■□□□□ 0.38
Sod1P08228 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sod1P08228 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sod1P08228 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sod1P08228 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sod1P08228 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sod1P08228 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sod1P08228 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.41■□□□□ 0.38
Sod1P08228 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.41■□□□□ 0.38
Sod1P08228 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms