Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sp1O89090 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sp1O89090 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sp1O89090 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sp1O89090 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sp1O89090 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sp1O89090 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.71■□□□□ 0.59
Sp1O89090 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.71■□□□□ 0.59
Sp1O89090 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sp1O89090 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sp1O89090 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sp1O89090 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sp1O89090 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sp1O89090 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Sp1O89090 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sp1O89090 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Sp1O89090 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sp1O89090 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sp1O89090 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.7■□□□□ 0.58
Sp1O89090 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.7■□□□□ 0.58
Sp1O89090 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sp1O89090 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sp1O89090 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.7■□□□□ 0.58
Sp1O89090 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sp1O89090 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Sp1O89090 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Sp1O89090 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.7■□□□□ 0.58
Sp1O89090 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.7■□□□□ 0.58
Sp1O89090 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.7■□□□□ 0.58
Sp1O89090 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sp1O89090 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sp1O89090 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sp1O89090 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sp1O89090 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sp1O89090 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.69■□□□□ 0.58
Sp1O89090 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sp1O89090 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sp1O89090 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.69■□□□□ 0.58
Sp1O89090 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.69■□□□□ 0.58
Sp1O89090 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sp1O89090 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sp1O89090 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sp1O89090 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sp1O89090 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.68■□□□□ 0.58
Sp1O89090 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.68■□□□□ 0.58
Sp1O89090 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sp1O89090 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.68■□□□□ 0.58
Sp1O89090 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sp1O89090 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sp1O89090 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sp1O89090 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sp1O89090 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sp1O89090 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sp1O89090 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sp1O89090 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.68■□□□□ 0.58
Sp1O89090 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.68■□□□□ 0.58
Sp1O89090 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Sp1O89090 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Sp1O89090 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sp1O89090 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sp1O89090 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sp1O89090 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sp1O89090 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sp1O89090 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sp1O89090 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sp1O89090 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sp1O89090 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sp1O89090 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.67■□□□□ 0.58
Sp1O89090 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.67■□□□□ 0.58
Sp1O89090 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.67■□□□□ 0.58
Sp1O89090 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Sp1O89090 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sp1O89090 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sp1O89090 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp1O89090 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp1O89090 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp1O89090 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sp1O89090 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp1O89090 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp1O89090 Gm5643-201ENSMUST00000117081 966 ntBASIC18.66■□□□□ 0.58
Sp1O89090 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.66■□□□□ 0.58
Sp1O89090 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sp1O89090 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp1O89090 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp1O89090 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp1O89090 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp1O89090 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp1O89090 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Sp1O89090 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp1O89090 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp1O89090 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp1O89090 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp1O89090 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sp1O89090 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sp1O89090 Gm11927-201ENSMUST00000118472 759 ntBASIC18.65■□□□□ 0.58
Sp1O89090 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.65■□□□□ 0.58
Sp1O89090 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp1O89090 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
Sp1O89090 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp1O89090 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms