Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac3O88895 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac3O88895 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.47■□□□□ 0.23
Hdac3O88895 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.47■□□□□ 0.23
Hdac3O88895 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Hdac3O88895 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
Hdac3O88895 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Hdac3O88895 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.47■□□□□ 0.23
Hdac3O88895 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.47■□□□□ 0.23
Hdac3O88895 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.47■□□□□ 0.23
Hdac3O88895 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Hdac3O88895 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Hdac3O88895 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac3O88895 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac3O88895 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac3O88895 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac3O88895 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac3O88895 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac3O88895 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.46■□□□□ 0.23
Hdac3O88895 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac3O88895 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac3O88895 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac3O88895 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac3O88895 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hdac3O88895 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Hdac3O88895 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hdac3O88895 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hdac3O88895 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.45■□□□□ 0.22
Hdac3O88895 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.45■□□□□ 0.22
Hdac3O88895 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.45■□□□□ 0.22
Hdac3O88895 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac3O88895 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Hdac3O88895 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac3O88895 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac3O88895 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Hdac3O88895 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.44■□□□□ 0.22
Hdac3O88895 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Hdac3O88895 Gm7860-201ENSMUST00000121190 879 ntBASIC16.44■□□□□ 0.22
Hdac3O88895 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac3O88895 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac3O88895 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac3O88895 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Hdac3O88895 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Hdac3O88895 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Hdac3O88895 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac3O88895 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hdac3O88895 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac3O88895 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac3O88895 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Hdac3O88895 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.42■□□□□ 0.22
Hdac3O88895 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac3O88895 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac3O88895 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac3O88895 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac3O88895 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac3O88895 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac3O88895 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms