Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh2d1aO88890 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh2d1aO88890 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh2d1aO88890 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sh2d1aO88890 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.04□□□□□ -0.32
Sh2d1aO88890 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.04□□□□□ -0.32
Sh2d1aO88890 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Gm9988-201ENSMUST00000069786 435 ntBASIC13.04□□□□□ -0.32
Sh2d1aO88890 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.04□□□□□ -0.32
Sh2d1aO88890 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh2d1aO88890 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.03□□□□□ -0.32
Sh2d1aO88890 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.03□□□□□ -0.32
Sh2d1aO88890 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Gm38205-201ENSMUST00000192243 258 ntBASIC13.03□□□□□ -0.32
Sh2d1aO88890 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.03□□□□□ -0.32
Sh2d1aO88890 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh2d1aO88890 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh2d1aO88890 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh2d1aO88890 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh2d1aO88890 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh2d1aO88890 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh2d1aO88890 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh2d1aO88890 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms