Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ttc3O88196 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ttc3O88196 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ttc3O88196 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ttc3O88196 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc3O88196 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.44■□□□□ 0.7
Ttc3O88196 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc3O88196 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc3O88196 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.44■□□□□ 0.7
Ttc3O88196 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc3O88196 Notumos-201ENSMUST00000151998 2659 ntBASIC19.44■□□□□ 0.7
Ttc3O88196 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc3O88196 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.44■□□□□ 0.7
Ttc3O88196 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.44■□□□□ 0.7
Ttc3O88196 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.44■□□□□ 0.7
Ttc3O88196 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc3O88196 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc3O88196 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc3O88196 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ttc3O88196 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc3O88196 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc3O88196 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc3O88196 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.43■□□□□ 0.7
Ttc3O88196 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.43■□□□□ 0.7
Ttc3O88196 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc3O88196 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc3O88196 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ttc3O88196 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc3O88196 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc3O88196 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc3O88196 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Ttc3O88196 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc3O88196 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ttc3O88196 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc3O88196 Gm37055-201ENSMUST00000191866 133 ntBASIC19.43■□□□□ 0.7
Ttc3O88196 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Ttc3O88196 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc3O88196 Flg-201ENSMUST00000050758 1488 ntBASIC19.43■□□□□ 0.7
Ttc3O88196 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc3O88196 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ttc3O88196 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ttc3O88196 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc3O88196 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc3O88196 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.42■□□□□ 0.7
Ttc3O88196 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ttc3O88196 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ttc3O88196 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc3O88196 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.42■□□□□ 0.7
Ttc3O88196 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc3O88196 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc3O88196 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.41■□□□□ 0.7
Ttc3O88196 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.41■□□□□ 0.7
Ttc3O88196 Mir5122-201ENSMUST00000175004 89 ntBASIC19.41■□□□□ 0.7
Ttc3O88196 Gm18025-201ENSMUST00000221733 862 ntBASIC19.41■□□□□ 0.7
Ttc3O88196 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc3O88196 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc3O88196 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.41■□□□□ 0.7
Ttc3O88196 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc3O88196 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc3O88196 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc3O88196 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc3O88196 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.41■□□□□ 0.7
Ttc3O88196 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc3O88196 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc3O88196 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ttc3O88196 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ttc3O88196 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ttc3O88196 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ttc3O88196 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.4■□□□□ 0.7
Ttc3O88196 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ttc3O88196 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ttc3O88196 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ttc3O88196 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.4■□□□□ 0.7
Ttc3O88196 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ttc3O88196 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ttc3O88196 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ttc3O88196 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ttc3O88196 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Ttc3O88196 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.39■□□□□ 0.7
Ttc3O88196 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ttc3O88196 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ttc3O88196 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ttc3O88196 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.39■□□□□ 0.69
Ttc3O88196 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.39■□□□□ 0.69
Ttc3O88196 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ttc3O88196 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ttc3O88196 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ttc3O88196 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc3O88196 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc3O88196 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc3O88196 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc3O88196 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc3O88196 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc3O88196 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.38■□□□□ 0.69
Ttc3O88196 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ttc3O88196 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.38■□□□□ 0.69
Ttc3O88196 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc3O88196 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc3O88196 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc3O88196 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms