Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.22■□□□□ 0.51
Pdlim1O70400 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.22■□□□□ 0.51
Pdlim1O70400 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pdlim1O70400 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim1O70400 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim1O70400 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim1O70400 Gm26524-201ENSMUST00000192339 390 ntBASIC18.21■□□□□ 0.51
Pdlim1O70400 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.21■□□□□ 0.51
Pdlim1O70400 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim1O70400 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.21■□□□□ 0.51
Pdlim1O70400 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim1O70400 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.21■□□□□ 0.51
Pdlim1O70400 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim1O70400 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pdlim1O70400 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim1O70400 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim1O70400 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim1O70400 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim1O70400 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pdlim1O70400 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.2■□□□□ 0.5
Pdlim1O70400 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim1O70400 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim1O70400 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim1O70400 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim1O70400 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pdlim1O70400 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim1O70400 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.2■□□□□ 0.5
Pdlim1O70400 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim1O70400 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim1O70400 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim1O70400 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim1O70400 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim1O70400 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim1O70400 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim1O70400 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim1O70400 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim1O70400 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pdlim1O70400 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.19■□□□□ 0.5
Pdlim1O70400 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim1O70400 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim1O70400 Rab3c-203ENSMUST00000224180 967 ntBASIC18.19■□□□□ 0.5
Pdlim1O70400 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.19■□□□□ 0.5
Pdlim1O70400 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim1O70400 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim1O70400 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim1O70400 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim1O70400 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.18■□□□□ 0.5
Pdlim1O70400 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim1O70400 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.18■□□□□ 0.5
Pdlim1O70400 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pdlim1O70400 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.18■□□□□ 0.5
Pdlim1O70400 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim1O70400 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim1O70400 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim1O70400 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim1O70400 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim1O70400 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pdlim1O70400 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim1O70400 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim1O70400 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim1O70400 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.17■□□□□ 0.5
Pdlim1O70400 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim1O70400 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.17■□□□□ 0.5
Pdlim1O70400 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.17■□□□□ 0.5
Pdlim1O70400 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim1O70400 Golph3-205ENSMUST00000228671 2842 ntBASIC18.17■□□□□ 0.5
Pdlim1O70400 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim1O70400 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pdlim1O70400 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim1O70400 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim1O70400 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim1O70400 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim1O70400 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.17■□□□□ 0.5
Pdlim1O70400 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim1O70400 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim1O70400 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim1O70400 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim1O70400 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim1O70400 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim1O70400 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim1O70400 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim1O70400 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim1O70400 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim1O70400 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim1O70400 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim1O70400 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim1O70400 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim1O70400 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.15■□□□□ 0.5
Pdlim1O70400 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim1O70400 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms