Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trdmt1O55055 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Trdmt1O55055 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trdmt1O55055 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trdmt1O55055 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trdmt1O55055 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trdmt1O55055 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trdmt1O55055 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trdmt1O55055 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trdmt1O55055 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Trdmt1O55055 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trdmt1O55055 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trdmt1O55055 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trdmt1O55055 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trdmt1O55055 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trdmt1O55055 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trdmt1O55055 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trdmt1O55055 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Trdmt1O55055 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trdmt1O55055 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trdmt1O55055 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trdmt1O55055 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Trdmt1O55055 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trdmt1O55055 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trdmt1O55055 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trdmt1O55055 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trdmt1O55055 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trdmt1O55055 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trdmt1O55055 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trdmt1O55055 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trdmt1O55055 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trdmt1O55055 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Trdmt1O55055 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trdmt1O55055 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trdmt1O55055 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trdmt1O55055 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trdmt1O55055 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trdmt1O55055 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trdmt1O55055 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.42■□□□□ 0.86
Trdmt1O55055 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trdmt1O55055 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trdmt1O55055 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trdmt1O55055 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trdmt1O55055 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trdmt1O55055 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trdmt1O55055 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trdmt1O55055 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Trdmt1O55055 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.41■□□□□ 0.86
Trdmt1O55055 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.41■□□□□ 0.86
Trdmt1O55055 Gm38285-201ENSMUST00000192928 922 ntBASIC20.41■□□□□ 0.86
Trdmt1O55055 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.41■□□□□ 0.86
Trdmt1O55055 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.41■□□□□ 0.86
Trdmt1O55055 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trdmt1O55055 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trdmt1O55055 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trdmt1O55055 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trdmt1O55055 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trdmt1O55055 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trdmt1O55055 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.41■□□□□ 0.86
Trdmt1O55055 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trdmt1O55055 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trdmt1O55055 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trdmt1O55055 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trdmt1O55055 Gm15375-201ENSMUST00000119510 849 ntBASIC20.4■□□□□ 0.86
Trdmt1O55055 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trdmt1O55055 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trdmt1O55055 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.4■□□□□ 0.86
Trdmt1O55055 Gm18025-201ENSMUST00000221733 862 ntBASIC20.4■□□□□ 0.86
Trdmt1O55055 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trdmt1O55055 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trdmt1O55055 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trdmt1O55055 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trdmt1O55055 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trdmt1O55055 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trdmt1O55055 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trdmt1O55055 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trdmt1O55055 Gm6433-201ENSMUST00000118634 875 ntBASIC20.39■□□□□ 0.85
Trdmt1O55055 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.39■□□□□ 0.85
Trdmt1O55055 Gm43799-201ENSMUST00000201845 579 ntBASIC20.39■□□□□ 0.85
Trdmt1O55055 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trdmt1O55055 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trdmt1O55055 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trdmt1O55055 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trdmt1O55055 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trdmt1O55055 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.38■□□□□ 0.85
Trdmt1O55055 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trdmt1O55055 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trdmt1O55055 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trdmt1O55055 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trdmt1O55055 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trdmt1O55055 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trdmt1O55055 Gm42545-201ENSMUST00000202755 922 ntBASIC20.38■□□□□ 0.85
Trdmt1O55055 Gm21814-202ENSMUST00000203277 873 ntBASIC20.38■□□□□ 0.85
Trdmt1O55055 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.38■□□□□ 0.85
Trdmt1O55055 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trdmt1O55055 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trdmt1O55055 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trdmt1O55055 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trdmt1O55055 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trdmt1O55055 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms