Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SncaO55042 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SncaO55042 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SncaO55042 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SncaO55042 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SncaO55042 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
SncaO55042 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SncaO55042 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SncaO55042 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.28■□□□□ 0.04
SncaO55042 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SncaO55042 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SncaO55042 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SncaO55042 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SncaO55042 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SncaO55042 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SncaO55042 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SncaO55042 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SncaO55042 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SncaO55042 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SncaO55042 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SncaO55042 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SncaO55042 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SncaO55042 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.27■□□□□ 0.04
SncaO55042 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SncaO55042 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
SncaO55042 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SncaO55042 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.27■□□□□ 0.04
SncaO55042 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SncaO55042 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SncaO55042 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SncaO55042 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SncaO55042 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SncaO55042 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SncaO55042 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SncaO55042 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SncaO55042 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SncaO55042 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SncaO55042 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
SncaO55042 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.26■□□□□ 0.03
SncaO55042 Smad6-203ENSMUST00000179458 273 ntBASIC15.26■□□□□ 0.03
SncaO55042 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.26■□□□□ 0.03
SncaO55042 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SncaO55042 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SncaO55042 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SncaO55042 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SncaO55042 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SncaO55042 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SncaO55042 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SncaO55042 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SncaO55042 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SncaO55042 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SncaO55042 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SncaO55042 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SncaO55042 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SncaO55042 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SncaO55042 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SncaO55042 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SncaO55042 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SncaO55042 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.25■□□□□ 0.03
SncaO55042 Gm7860-201ENSMUST00000121190 879 ntBASIC15.25■□□□□ 0.03
SncaO55042 Gm27801-201ENSMUST00000184174 223 ntBASIC15.25■□□□□ 0.03
SncaO55042 Gm8493-201ENSMUST00000196881 489 ntBASIC15.25■□□□□ 0.03
SncaO55042 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SncaO55042 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SncaO55042 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SncaO55042 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SncaO55042 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SncaO55042 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SncaO55042 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SncaO55042 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SncaO55042 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SncaO55042 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SncaO55042 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SncaO55042 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SncaO55042 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
SncaO55042 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SncaO55042 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SncaO55042 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SncaO55042 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SncaO55042 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SncaO55042 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.24■□□□□ 0.03
SncaO55042 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SncaO55042 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SncaO55042 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms