Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scamp3O35609 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scamp3O35609 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scamp3O35609 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scamp3O35609 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scamp3O35609 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scamp3O35609 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scamp3O35609 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Scamp3O35609 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scamp3O35609 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scamp3O35609 Gm7290-201ENSMUST00000104990 617 ntBASIC18.33■□□□□ 0.52
Scamp3O35609 Gm12918-201ENSMUST00000120234 636 ntBASIC18.33■□□□□ 0.52
Scamp3O35609 Gm15710-201ENSMUST00000121821 636 ntBASIC18.33■□□□□ 0.52
Scamp3O35609 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.33■□□□□ 0.52
Scamp3O35609 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.33■□□□□ 0.52
Scamp3O35609 Gm5075-201ENSMUST00000196916 622 ntBASIC18.33■□□□□ 0.52
Scamp3O35609 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.33■□□□□ 0.52
Scamp3O35609 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.33■□□□□ 0.52
Scamp3O35609 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scamp3O35609 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.33■□□□□ 0.52
Scamp3O35609 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.33■□□□□ 0.52
Scamp3O35609 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.33■□□□□ 0.52
Scamp3O35609 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scamp3O35609 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scamp3O35609 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scamp3O35609 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Scamp3O35609 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scamp3O35609 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.32■□□□□ 0.52
Scamp3O35609 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Scamp3O35609 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scamp3O35609 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scamp3O35609 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.32■□□□□ 0.52
Scamp3O35609 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scamp3O35609 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scamp3O35609 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scamp3O35609 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scamp3O35609 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Scamp3O35609 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.32■□□□□ 0.52
Scamp3O35609 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Scamp3O35609 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.32■□□□□ 0.52
Scamp3O35609 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scamp3O35609 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scamp3O35609 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Scamp3O35609 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scamp3O35609 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Scamp3O35609 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Scamp3O35609 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.31■□□□□ 0.52
Scamp3O35609 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Scamp3O35609 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.31■□□□□ 0.52
Scamp3O35609 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Scamp3O35609 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scamp3O35609 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.3■□□□□ 0.52
Scamp3O35609 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.3■□□□□ 0.52
Scamp3O35609 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Scamp3O35609 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.3■□□□□ 0.52
Scamp3O35609 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 Gm4968-201ENSMUST00000071458 858 ntBASIC18.3■□□□□ 0.52
Scamp3O35609 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Scamp3O35609 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scamp3O35609 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scamp3O35609 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Scamp3O35609 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scamp3O35609 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scamp3O35609 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scamp3O35609 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scamp3O35609 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Scamp3O35609 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scamp3O35609 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.29■□□□□ 0.52
Scamp3O35609 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scamp3O35609 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Scamp3O35609 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scamp3O35609 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scamp3O35609 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scamp3O35609 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms