Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Efnb3O35393 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Efnb3O35393 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Gm12821-201ENSMUST00000120022 600 ntBASIC14.56□□□□□ -0.08
Efnb3O35393 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.56□□□□□ -0.08
Efnb3O35393 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.56□□□□□ -0.08
Efnb3O35393 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.56□□□□□ -0.08
Efnb3O35393 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Efnb3O35393 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Efnb3O35393 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.55□□□□□ -0.08
Efnb3O35393 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Efnb3O35393 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.55□□□□□ -0.08
Efnb3O35393 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Efnb3O35393 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Efnb3O35393 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Efnb3O35393 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Efnb3O35393 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
Efnb3O35393 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Efnb3O35393 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Efnb3O35393 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Efnb3O35393 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Efnb3O35393 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Efnb3O35393 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Efnb3O35393 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.54□□□□□ -0.08
Efnb3O35393 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Efnb3O35393 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.54□□□□□ -0.08
Efnb3O35393 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Efnb3O35393 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Efnb3O35393 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Efnb3O35393 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Efnb3O35393 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Efnb3O35393 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.53□□□□□ -0.08
Efnb3O35393 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.53□□□□□ -0.08
Efnb3O35393 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Efnb3O35393 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Efnb3O35393 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Efnb3O35393 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Efnb3O35393 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.52□□□□□ -0.08
Efnb3O35393 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Efnb3O35393 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.52□□□□□ -0.08
Efnb3O35393 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Efnb3O35393 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.52□□□□□ -0.08
Efnb3O35393 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Efnb3O35393 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Efnb3O35393 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Efnb3O35393 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms