Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.71■□□□□ 0.75
Cpsf2O35218 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cpsf2O35218 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf2O35218 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf2O35218 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf2O35218 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.7■□□□□ 0.74
Cpsf2O35218 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.7■□□□□ 0.74
Cpsf2O35218 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cpsf2O35218 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.7■□□□□ 0.74
Cpsf2O35218 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.7■□□□□ 0.74
Cpsf2O35218 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.7■□□□□ 0.74
Cpsf2O35218 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Cpsf2O35218 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf2O35218 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf2O35218 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf2O35218 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf2O35218 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf2O35218 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf2O35218 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf2O35218 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf2O35218 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf2O35218 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf2O35218 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.69■□□□□ 0.74
Cpsf2O35218 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Cpsf2O35218 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf2O35218 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf2O35218 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.69■□□□□ 0.74
Cpsf2O35218 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf2O35218 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf2O35218 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.69■□□□□ 0.74
Cpsf2O35218 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf2O35218 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf2O35218 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf2O35218 Gm43060-201ENSMUST00000200621 289 ntBASIC19.68■□□□□ 0.74
Cpsf2O35218 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf2O35218 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf2O35218 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.68■□□□□ 0.74
Cpsf2O35218 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cpsf2O35218 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf2O35218 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Cpsf2O35218 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cpsf2O35218 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.67■□□□□ 0.74
Cpsf2O35218 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.67■□□□□ 0.74
Cpsf2O35218 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cpsf2O35218 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf2O35218 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf2O35218 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf2O35218 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cpsf2O35218 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf2O35218 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf2O35218 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf2O35218 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.66■□□□□ 0.74
Cpsf2O35218 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.66■□□□□ 0.74
Cpsf2O35218 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.66■□□□□ 0.74
Cpsf2O35218 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cpsf2O35218 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf2O35218 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf2O35218 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf2O35218 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf2O35218 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf2O35218 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cpsf2O35218 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf2O35218 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf2O35218 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cpsf2O35218 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf2O35218 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf2O35218 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf2O35218 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf2O35218 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf2O35218 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms