Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa8J3QNX5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa8J3QNX5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Gm45102-201ENSMUST00000207427 857 ntBASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa8J3QNX5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Gm7860-201ENSMUST00000121190 879 ntBASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Spcs1-204ENSMUST00000226782 949 ntBASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa8J3QNX5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Shisa8J3QNX5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa8J3QNX5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa8J3QNX5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa8J3QNX5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.77■□□□□ 0.28
Shisa8J3QNX5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa8J3QNX5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa8J3QNX5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.77■□□□□ 0.28
Shisa8J3QNX5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa8J3QNX5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa8J3QNX5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa8J3QNX5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shisa8J3QNX5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shisa8J3QNX5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Shisa8J3QNX5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Shisa8J3QNX5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shisa8J3QNX5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Gm12251-201ENSMUST00000117893 792 ntBASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa8J3QNX5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms