Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Gm11249-201ENSMUST00000117071 859 ntBASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17535J3KMR8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17535J3KMR8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm17535J3KMR8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm17535J3KMR8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm17535J3KMR8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Gm17535J3KMR8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Gm17535J3KMR8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm17535J3KMR8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.69■□□□□ 0.74
Gm17535J3KMR8 Gm13168-201ENSMUST00000121771 632 ntBASIC19.69■□□□□ 0.74
Gm17535J3KMR8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm17535J3KMR8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.69■□□□□ 0.74
Gm17535J3KMR8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm17535J3KMR8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm17535J3KMR8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm17535J3KMR8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gm17535J3KMR8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.68■□□□□ 0.74
Gm17535J3KMR8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm17535J3KMR8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm17535J3KMR8 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.68■□□□□ 0.74
Gm17535J3KMR8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm17535J3KMR8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm17535J3KMR8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.68■□□□□ 0.74
Gm17535J3KMR8 Gm8520-201ENSMUST00000186517 868 ntBASIC19.68■□□□□ 0.74
Gm17535J3KMR8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm17535J3KMR8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm17535J3KMR8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm17535J3KMR8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm17535J3KMR8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm17535J3KMR8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm17535J3KMR8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm17535J3KMR8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm17535J3KMR8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.67■□□□□ 0.74
Gm17535J3KMR8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm17535J3KMR8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm17535J3KMR8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.67■□□□□ 0.74
Gm17535J3KMR8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm17535J3KMR8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm17535J3KMR8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Gm17535J3KMR8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.66■□□□□ 0.74
Gm17535J3KMR8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm17535J3KMR8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.66■□□□□ 0.74
Gm17535J3KMR8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm17535J3KMR8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm17535J3KMR8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm17535J3KMR8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Gm17535J3KMR8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Gm17535J3KMR8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm17535J3KMR8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm17535J3KMR8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm17535J3KMR8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm17535J3KMR8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm17535J3KMR8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Gm17535J3KMR8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm17535J3KMR8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm17535J3KMR8 Gm22240-201ENSMUST00000175225 82 ntBASIC19.65■□□□□ 0.74
Gm17535J3KMR8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.65■□□□□ 0.74
Gm17535J3KMR8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm17535J3KMR8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm17535J3KMR8 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.65■□□□□ 0.74
Gm17535J3KMR8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm17535J3KMR8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm17535J3KMR8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gm17535J3KMR8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm17535J3KMR8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm17535J3KMR8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm17535J3KMR8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gm17535J3KMR8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm17535J3KMR8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Gm17535J3KMR8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm17535J3KMR8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm17535J3KMR8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm17535J3KMR8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms