Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim55G3X8Y1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim55G3X8Y1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim55G3X8Y1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim55G3X8Y1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim55G3X8Y1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim55G3X8Y1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.95■□□□□ 0.62
Trim55G3X8Y1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Trim55G3X8Y1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim55G3X8Y1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim55G3X8Y1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim55G3X8Y1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim55G3X8Y1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim55G3X8Y1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim55G3X8Y1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim55G3X8Y1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim55G3X8Y1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim55G3X8Y1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim55G3X8Y1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim55G3X8Y1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim55G3X8Y1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim55G3X8Y1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim55G3X8Y1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim55G3X8Y1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim55G3X8Y1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim55G3X8Y1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim55G3X8Y1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim55G3X8Y1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim55G3X8Y1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim55G3X8Y1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim55G3X8Y1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim55G3X8Y1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim55G3X8Y1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.9■□□□□ 0.62
Trim55G3X8Y1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trim55G3X8Y1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim55G3X8Y1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim55G3X8Y1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim55G3X8Y1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Trim55G3X8Y1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim55G3X8Y1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim55G3X8Y1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms