Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh9F8VPK8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh9F8VPK8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh9F8VPK8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdh9F8VPK8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh9F8VPK8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh9F8VPK8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh9F8VPK8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh9F8VPK8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh9F8VPK8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh9F8VPK8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh9F8VPK8 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.89■□□□□ 0.61
Pcdh9F8VPK8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdh9F8VPK8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh9F8VPK8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcdh9F8VPK8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcdh9F8VPK8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdh9F8VPK8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Pcdh9F8VPK8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh9F8VPK8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Pcdh9F8VPK8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdh9F8VPK8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh9F8VPK8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh9F8VPK8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms