Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Pcdh1F7BJK1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Gm21956-201ENSMUST00000179946 522 ntBASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh1F7BJK1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Pcdh1F7BJK1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdh1F7BJK1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh1F7BJK1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Gm12821-201ENSMUST00000120022 600 ntBASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh1F7BJK1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Gm27801-201ENSMUST00000184174 223 ntBASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdh1F7BJK1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Gm11421-201ENSMUST00000122124 294 ntBASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Fst-202ENSMUST00000223640 2612 ntBASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh1F7BJK1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh1F7BJK1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms