Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc149F6V035 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc149F6V035 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.74■□□□□ 0.59
Ccdc149F6V035 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.74■□□□□ 0.59
Ccdc149F6V035 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.74■□□□□ 0.59
Ccdc149F6V035 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.74■□□□□ 0.59
Ccdc149F6V035 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc149F6V035 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc149F6V035 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc149F6V035 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc149F6V035 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc149F6V035 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc149F6V035 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc149F6V035 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc149F6V035 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.73■□□□□ 0.59
Ccdc149F6V035 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc149F6V035 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc149F6V035 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc149F6V035 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.73■□□□□ 0.59
Ccdc149F6V035 Gm22325-201ENSMUST00000158904 308 ntBASIC18.73■□□□□ 0.59
Ccdc149F6V035 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc149F6V035 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ccdc149F6V035 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.73■□□□□ 0.59
Ccdc149F6V035 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc149F6V035 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc149F6V035 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc149F6V035 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc149F6V035 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Ccdc149F6V035 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc149F6V035 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc149F6V035 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc149F6V035 Gm15378-201ENSMUST00000121894 207 ntBASIC18.72■□□□□ 0.59
Ccdc149F6V035 Gm6576-201ENSMUST00000169678 883 ntBASIC18.72■□□□□ 0.59
Ccdc149F6V035 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.72■□□□□ 0.59
Ccdc149F6V035 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc149F6V035 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc149F6V035 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc149F6V035 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc149F6V035 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc149F6V035 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc149F6V035 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.71■□□□□ 0.59
Ccdc149F6V035 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc149F6V035 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.71■□□□□ 0.59
Ccdc149F6V035 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc149F6V035 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.71■□□□□ 0.59
Ccdc149F6V035 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc149F6V035 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc149F6V035 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc149F6V035 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc149F6V035 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc149F6V035 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc149F6V035 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc149F6V035 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc149F6V035 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc149F6V035 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc149F6V035 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc149F6V035 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc149F6V035 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc149F6V035 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc149F6V035 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc149F6V035 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc149F6V035 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc149F6V035 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc149F6V035 Gm11927-201ENSMUST00000118472 759 ntBASIC18.69■□□□□ 0.58
Ccdc149F6V035 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc149F6V035 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.69■□□□□ 0.58
Ccdc149F6V035 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.69■□□□□ 0.58
Ccdc149F6V035 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.69■□□□□ 0.58
Ccdc149F6V035 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc149F6V035 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc149F6V035 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc149F6V035 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc149F6V035 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc149F6V035 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc149F6V035 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc149F6V035 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc149F6V035 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc149F6V035 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.68■□□□□ 0.58
Ccdc149F6V035 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc149F6V035 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc149F6V035 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc149F6V035 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc149F6V035 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc149F6V035 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc149F6V035 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms