Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10477F6SW83 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10477F6SW83 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.16■□□□□ 0.34
Gm10477F6SW83 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10477F6SW83 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.15■□□□□ 0.34
Gm10477F6SW83 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.15■□□□□ 0.34
Gm10477F6SW83 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10477F6SW83 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm10477F6SW83 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10477F6SW83 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10477F6SW83 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10477F6SW83 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10477F6SW83 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10477F6SW83 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10477F6SW83 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.14■□□□□ 0.33
Gm10477F6SW83 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm10477F6SW83 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm10477F6SW83 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10477F6SW83 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10477F6SW83 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10477F6SW83 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.13■□□□□ 0.33
Gm10477F6SW83 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.13■□□□□ 0.33
Gm10477F6SW83 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.13■□□□□ 0.33
Gm10477F6SW83 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.13■□□□□ 0.33
Gm10477F6SW83 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm10477F6SW83 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10477F6SW83 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm10477F6SW83 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10477F6SW83 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10477F6SW83 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10477F6SW83 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10477F6SW83 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10477F6SW83 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10477F6SW83 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10477F6SW83 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms