Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm38285-201ENSMUST00000192928 922 ntBASIC22.3■■□□□ 1.16
Ube4aE9Q735 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC22.3■■□□□ 1.16
Ube4aE9Q735 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ube4aE9Q735 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ube4aE9Q735 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ube4aE9Q735 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ube4aE9Q735 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ube4aE9Q735 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
Ube4aE9Q735 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.29■■□□□ 1.16
Ube4aE9Q735 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ube4aE9Q735 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ube4aE9Q735 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ube4aE9Q735 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ube4aE9Q735 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Ube4aE9Q735 Gm10138-203ENSMUST00000206952 366 ntBASIC22.29■■□□□ 1.16
Ube4aE9Q735 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ube4aE9Q735 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ube4aE9Q735 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Ube4aE9Q735 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ube4aE9Q735 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ube4aE9Q735 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ube4aE9Q735 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC22.28■■□□□ 1.16
Ube4aE9Q735 Gm9484-201ENSMUST00000195892 1159 ntBASIC22.28■■□□□ 1.16
Ube4aE9Q735 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.28■■□□□ 1.16
Ube4aE9Q735 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ube4aE9Q735 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ube4aE9Q735 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ube4aE9Q735 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ube4aE9Q735 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ube4aE9Q735 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ube4aE9Q735 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Ube4aE9Q735 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC22.27■■□□□ 1.16
Ube4aE9Q735 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ube4aE9Q735 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ube4aE9Q735 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.27■■□□□ 1.15
Ube4aE9Q735 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ube4aE9Q735 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Ube4aE9Q735 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Ube4aE9Q735 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ube4aE9Q735 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.26■■□□□ 1.15
Ube4aE9Q735 Gm37055-201ENSMUST00000191866 133 ntBASIC22.26■■□□□ 1.15
Ube4aE9Q735 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC22.26■■□□□ 1.15
Ube4aE9Q735 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ube4aE9Q735 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC22.26■■□□□ 1.15
Ube4aE9Q735 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ube4aE9Q735 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ube4aE9Q735 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ube4aE9Q735 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ube4aE9Q735 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ube4aE9Q735 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ube4aE9Q735 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ube4aE9Q735 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ube4aE9Q735 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ube4aE9Q735 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC22.25■■□□□ 1.15
Ube4aE9Q735 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ube4aE9Q735 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ube4aE9Q735 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ube4aE9Q735 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ube4aE9Q735 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ube4aE9Q735 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ube4aE9Q735 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ube4aE9Q735 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ube4aE9Q735 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ube4aE9Q735 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ube4aE9Q735 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ube4aE9Q735 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ube4aE9Q735 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ube4aE9Q735 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Ube4aE9Q735 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Ube4aE9Q735 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Ube4aE9Q735 AC175538.1-201ENSMUST00000225343 1269 ntBASIC22.23■■□□□ 1.15
Ube4aE9Q735 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.23■■□□□ 1.15
Ube4aE9Q735 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC22.23■■□□□ 1.15
Ube4aE9Q735 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ube4aE9Q735 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ube4aE9Q735 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ube4aE9Q735 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ube4aE9Q735 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ube4aE9Q735 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Ube4aE9Q735 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ube4aE9Q735 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ube4aE9Q735 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ube4aE9Q735 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Ube4aE9Q735 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ube4aE9Q735 Gm15375-201ENSMUST00000119510 849 ntBASIC22.22■■□□□ 1.15
Ube4aE9Q735 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ube4aE9Q735 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ube4aE9Q735 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ube4aE9Q735 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Ube4aE9Q735 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ube4aE9Q735 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ube4aE9Q735 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ube4aE9Q735 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ube4aE9Q735 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ube4aE9Q735 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ube4aE9Q735 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ube4aE9Q735 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Ube4aE9Q735 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
Ube4aE9Q735 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.21■■□□□ 1.15
Ube4aE9Q735 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms