Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Gm7889-201ENSMUST00000185591 958 ntBASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Dchs1E9PVD3 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.47■□□□□ 0.23
Dchs1E9PVD3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dchs1E9PVD3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Dchs1E9PVD3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dchs1E9PVD3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.47■□□□□ 0.23
Dchs1E9PVD3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dchs1E9PVD3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Dchs1E9PVD3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dchs1E9PVD3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Dchs1E9PVD3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Dchs1E9PVD3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Dchs1E9PVD3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dchs1E9PVD3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dchs1E9PVD3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Dchs1E9PVD3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.46■□□□□ 0.23
Dchs1E9PVD3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dchs1E9PVD3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dchs1E9PVD3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dchs1E9PVD3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Dchs1E9PVD3 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.46■□□□□ 0.23
Dchs1E9PVD3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
Dchs1E9PVD3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Dchs1E9PVD3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dchs1E9PVD3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Dchs1E9PVD3 Gm23634-201ENSMUST00000175071 91 ntBASIC16.46■□□□□ 0.22
Dchs1E9PVD3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Dchs1E9PVD3 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.46■□□□□ 0.22
Dchs1E9PVD3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Dchs1E9PVD3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Dchs1E9PVD3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Dchs1E9PVD3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dchs1E9PVD3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.45■□□□□ 0.22
Dchs1E9PVD3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Dchs1E9PVD3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dchs1E9PVD3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dchs1E9PVD3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Dchs1E9PVD3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dchs1E9PVD3 Gm13158-201ENSMUST00000122007 736 ntBASIC16.45■□□□□ 0.22
Dchs1E9PVD3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Dchs1E9PVD3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Dchs1E9PVD3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dchs1E9PVD3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Dchs1E9PVD3 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Dchs1E9PVD3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Dchs1E9PVD3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dchs1E9PVD3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Dchs1E9PVD3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dchs1E9PVD3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dchs1E9PVD3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Dchs1E9PVD3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dchs1E9PVD3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Dchs1E9PVD3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Dchs1E9PVD3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dchs1E9PVD3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dchs1E9PVD3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dchs1E9PVD3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Dchs1E9PVD3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dchs1E9PVD3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Dchs1E9PVD3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Dchs1E9PVD3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Dchs1E9PVD3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.4■□□□□ 0.22
Dchs1E9PVD3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dchs1E9PVD3 Golph3-205ENSMUST00000228671 2842 ntBASIC16.4■□□□□ 0.22
Dchs1E9PVD3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms