Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11127A7VMS2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11127A7VMS2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11127A7VMS2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11127A7VMS2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm11127A7VMS2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.31■□□□□ 0.2
Gm11127A7VMS2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11127A7VMS2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11127A7VMS2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm11127A7VMS2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Gm11127A7VMS2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11127A7VMS2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Gm11127A7VMS2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11127A7VMS2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11127A7VMS2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11127A7VMS2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11127A7VMS2 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11127A7VMS2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.29■□□□□ 0.2
Gm11127A7VMS2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11127A7VMS2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm11127A7VMS2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm11127A7VMS2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm11127A7VMS2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm11127A7VMS2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm11127A7VMS2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm11127A7VMS2 Gm21956-201ENSMUST00000179946 522 ntBASIC16.27■□□□□ 0.2
Gm11127A7VMS2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.27■□□□□ 0.2
Gm11127A7VMS2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Gm11127A7VMS2 Serp2-204ENSMUST00000228055 705 ntBASIC16.27■□□□□ 0.2
Gm11127A7VMS2 Gm13241-201ENSMUST00000094493 780 ntBASIC16.27■□□□□ 0.2
Gm11127A7VMS2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm11127A7VMS2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm11127A7VMS2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm11127A7VMS2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm11127A7VMS2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms