Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh2d4bA6X942 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.73■□□□□ 0.75
Sh2d4bA6X942 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Sh2d4bA6X942 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d4bA6X942 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d4bA6X942 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d4bA6X942 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d4bA6X942 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d4bA6X942 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d4bA6X942 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Sh2d4bA6X942 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d4bA6X942 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d4bA6X942 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d4bA6X942 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d4bA6X942 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d4bA6X942 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d4bA6X942 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d4bA6X942 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d4bA6X942 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d4bA6X942 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d4bA6X942 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.7■□□□□ 0.74
Sh2d4bA6X942 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Sh2d4bA6X942 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sh2d4bA6X942 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d4bA6X942 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d4bA6X942 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sh2d4bA6X942 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d4bA6X942 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d4bA6X942 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
Sh2d4bA6X942 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sh2d4bA6X942 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.69■□□□□ 0.74
Sh2d4bA6X942 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.69■□□□□ 0.74
Sh2d4bA6X942 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d4bA6X942 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Sh2d4bA6X942 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d4bA6X942 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4bA6X942 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4bA6X942 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4bA6X942 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.68■□□□□ 0.74
Sh2d4bA6X942 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4bA6X942 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4bA6X942 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Sh2d4bA6X942 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Sh2d4bA6X942 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4bA6X942 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4bA6X942 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.68■□□□□ 0.74
Sh2d4bA6X942 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d4bA6X942 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d4bA6X942 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d4bA6X942 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.66■□□□□ 0.74
Sh2d4bA6X942 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d4bA6X942 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d4bA6X942 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d4bA6X942 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d4bA6X942 Gm715-201ENSMUST00000117865 831 ntBASIC19.66■□□□□ 0.74
Sh2d4bA6X942 Gm2559-201ENSMUST00000201323 363 ntBASIC19.66■□□□□ 0.74
Sh2d4bA6X942 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d4bA6X942 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.66■□□□□ 0.74
Sh2d4bA6X942 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.66■□□□□ 0.74
Sh2d4bA6X942 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.66■□□□□ 0.74
Sh2d4bA6X942 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d4bA6X942 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d4bA6X942 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d4bA6X942 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d4bA6X942 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Sh2d4bA6X942 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Sh2d4bA6X942 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d4bA6X942 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d4bA6X942 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sh2d4bA6X942 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.65■□□□□ 0.74
Sh2d4bA6X942 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.65■□□□□ 0.74
Sh2d4bA6X942 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms