Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smim17A0A504 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smim17A0A504 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smim17A0A504 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.77■□□□□ 0.27
Smim17A0A504 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smim17A0A504 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim17A0A504 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim17A0A504 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smim17A0A504 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smim17A0A504 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Smim17A0A504 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim17A0A504 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Smim17A0A504 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim17A0A504 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smim17A0A504 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smim17A0A504 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim17A0A504 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim17A0A504 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Smim17A0A504 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.76■□□□□ 0.27
Smim17A0A504 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim17A0A504 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Smim17A0A504 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim17A0A504 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.75■□□□□ 0.27
Smim17A0A504 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.75■□□□□ 0.27
Smim17A0A504 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.75■□□□□ 0.27
Smim17A0A504 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smim17A0A504 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.74■□□□□ 0.27
Smim17A0A504 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.74■□□□□ 0.27
Smim17A0A504 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.74■□□□□ 0.27
Smim17A0A504 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
Smim17A0A504 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim17A0A504 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smim17A0A504 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim17A0A504 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim17A0A504 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.73■□□□□ 0.27
Smim17A0A504 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smim17A0A504 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Smim17A0A504 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim17A0A504 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim17A0A504 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim17A0A504 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smim17A0A504 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim17A0A504 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smim17A0A504 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim17A0A504 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim17A0A504 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim17A0A504 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Smim17A0A504 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim17A0A504 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim17A0A504 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim17A0A504 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smim17A0A504 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim17A0A504 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Smim17A0A504 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim17A0A504 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim17A0A504 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim17A0A504 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim17A0A504 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim17A0A504 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim17A0A504 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim17A0A504 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.71■□□□□ 0.27
Smim17A0A504 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim17A0A504 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim17A0A504 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.71■□□□□ 0.27
Smim17A0A504 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.71■□□□□ 0.27
Smim17A0A504 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Smim17A0A504 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.71■□□□□ 0.27
Smim17A0A504 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Smim17A0A504 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim17A0A504 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Smim17A0A504 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms