Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Igkv1-88A0A140T8N1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv1-88A0A140T8N1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Igkv1-88A0A140T8N1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv1-88A0A140T8N1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv1-88A0A140T8N1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv1-88A0A140T8N1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv1-88A0A140T8N1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv1-88A0A140T8N1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv1-88A0A140T8N1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv1-88A0A140T8N1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Igkv1-88A0A140T8N1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv1-88A0A140T8N1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv1-88A0A140T8N1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv1-88A0A140T8N1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.2□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.2□□□□□ -0.46
Igkv1-88A0A140T8N1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv1-88A0A140T8N1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv1-88A0A140T8N1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv1-88A0A140T8N1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Rarb-207ENSMUST00000225921 2756 ntBASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv1-88A0A140T8N1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Serp2-204ENSMUST00000228055 705 ntBASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv1-88A0A140T8N1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm45102-201ENSMUST00000207427 857 ntBASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Golgb1-201ENSMUST00000023534 498 ntBASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv1-88A0A140T8N1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms