Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 BC021767-201ENSMUST00000126387 1716 ntBASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gm7514-201ENSMUST00000209475 934 ntBASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-4A0A0G2JG01 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-4A0A0G2JG01 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav13n-4A0A0G2JG01 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav13n-4A0A0G2JG01 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Rarb-207ENSMUST00000225921 2756 ntBASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms