Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv8-27A0A0G2JF28 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Gm15743-202ENSMUST00000182690 1901 ntBASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Gm27502-201ENSMUST00000183495 199 ntBASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 AC154266.1-201ENSMUST00000223190 503 ntBASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-27A0A0G2JF28 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Cxcl14-202ENSMUST00000224801 1467 ntBASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Gm14523-201ENSMUST00000117260 558 ntBASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-27A0A0G2JF28 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Igkv8-27A0A0G2JF28 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Igkv8-27A0A0G2JF28 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Igkv8-27A0A0G2JF28 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-27A0A0G2JF28 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms