Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Gm43759-201ENSMUST00000196925 1261 ntBASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Gm15820-201ENSMUST00000201566 728 ntBASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3n-3A0A0G2JEM0 AA386476-201ENSMUST00000098781 1665 ntBASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms