Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Gm45102-201ENSMUST00000207427 857 ntBASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav19A0A0B4J1K4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 Rps24-207ENSMUST00000224568 714 ntBASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav19A0A0B4J1K4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Spcs1-204ENSMUST00000226782 949 ntBASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav19A0A0B4J1K4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Gm14117-201ENSMUST00000122417 843 ntBASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav19A0A0B4J1K4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav19A0A0B4J1K4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav19A0A0B4J1K4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav19A0A0B4J1K4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav19A0A0B4J1K4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav19A0A0B4J1K4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav19A0A0B4J1K4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav19A0A0B4J1K4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav19A0A0B4J1K4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav19A0A0B4J1K4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav19A0A0B4J1K4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav19A0A0B4J1K4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav19A0A0B4J1K4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav19A0A0B4J1K4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav19A0A0B4J1K4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Gm7860-201ENSMUST00000121190 879 ntBASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav19A0A0B4J1K4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms