Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav4-3A0A0B4J1K1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-3A0A0B4J1K1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-3A0A0B4J1K1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms