Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv2A0A0B4J1G8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv2A0A0B4J1G8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv2A0A0B4J1G8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trbv2A0A0B4J1G8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv2A0A0B4J1G8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trbv2A0A0B4J1G8 Gm11421-201ENSMUST00000122124 294 ntBASIC16.39■□□□□ 0.21
Trbv2A0A0B4J1G8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv2A0A0B4J1G8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv2A0A0B4J1G8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv2A0A0B4J1G8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv2A0A0B4J1G8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv2A0A0B4J1G8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv2A0A0B4J1G8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Smad6-203ENSMUST00000179458 273 ntBASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.38■□□□□ 0.21
Trbv2A0A0B4J1G8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv2A0A0B4J1G8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv2A0A0B4J1G8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv2A0A0B4J1G8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv2A0A0B4J1G8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.37■□□□□ 0.21
Trbv2A0A0B4J1G8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv2A0A0B4J1G8 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.37■□□□□ 0.21
Trbv2A0A0B4J1G8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv2A0A0B4J1G8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trbv2A0A0B4J1G8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.37■□□□□ 0.21
Trbv2A0A0B4J1G8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv2A0A0B4J1G8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.37■□□□□ 0.21
Trbv2A0A0B4J1G8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trbv2A0A0B4J1G8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv2A0A0B4J1G8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv2A0A0B4J1G8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.36■□□□□ 0.21
Trbv2A0A0B4J1G8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv2A0A0B4J1G8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trbv2A0A0B4J1G8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv2A0A0B4J1G8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trbv2A0A0B4J1G8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.36■□□□□ 0.21
Trbv2A0A0B4J1G8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv2A0A0B4J1G8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv2A0A0B4J1G8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv2A0A0B4J1G8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Fst-202ENSMUST00000223640 2612 ntBASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv2A0A0B4J1G8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv2A0A0B4J1G8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv2A0A0B4J1G8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv2A0A0B4J1G8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv2A0A0B4J1G8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.33■□□□□ 0.2
Trbv2A0A0B4J1G8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv2A0A0B4J1G8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv2A0A0B4J1G8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms