Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-47A0A0A6YY41 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-47A0A0A6YY41 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-47A0A0A6YY41 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Ighv1-47A0A0A6YY41 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-47A0A0A6YY41 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-47A0A0A6YY41 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Ighv1-47A0A0A6YY41 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-47A0A0A6YY41 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms