Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv3-4A0A0A6YXF1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Gm5417-201ENSMUST00000079706 384 ntBASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Mtag2-201ENSMUST00000058665 714 ntBASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Zfp783-201ENSMUST00000095946 670 ntBASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.29■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.29■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Gm10138-203ENSMUST00000206952 366 ntBASIC15.29■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.29■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv3-4A0A0A6YXF1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms