Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Mir7075-201ENSMUST00000184187 82 ntBASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6n-6A0A075B6B2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6n-6A0A075B6B2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6n-6A0A075B6B2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6n-6A0A075B6B2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav6n-6A0A075B6B2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav6n-6A0A075B6B2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6n-6A0A075B6B2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6n-6A0A075B6B2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6n-6A0A075B6B2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6n-6A0A075B6B2 Gm45417-201ENSMUST00000209533 758 ntBASIC13.71□□□□□ -0.21
Trav6n-6A0A075B6B2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav6n-6A0A075B6B2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6n-6A0A075B6B2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.71□□□□□ -0.21
Trav6n-6A0A075B6B2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6n-6A0A075B6B2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6n-6A0A075B6B2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6n-6A0A075B6B2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Gm8493-201ENSMUST00000196881 489 ntBASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Spcs1-204ENSMUST00000226782 949 ntBASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav6n-6A0A075B6B2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-6A0A075B6B2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms