Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.26□□□□□ -0.13
Trav9d-1A0A075B699 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Gm26833-201ENSMUST00000180899 440 ntBASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-1A0A075B699 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav9d-1A0A075B699 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-1A0A075B699 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.22□□□□□ -0.13
Trav9d-1A0A075B699 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav9d-1A0A075B699 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trav9d-1A0A075B699 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-1A0A075B699 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-1A0A075B699 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-1A0A075B699 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-1A0A075B699 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-1A0A075B699 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-1A0A075B699 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-1A0A075B699 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-1A0A075B699 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-1A0A075B699 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-1A0A075B699 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Gm38205-201ENSMUST00000192243 258 ntBASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-1A0A075B699 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms