Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Trav5-4A0A075B652 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5-4A0A075B652 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav5-4A0A075B652 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-4A0A075B652 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.38■□□□□ 0.05
Trav5-4A0A075B652 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-4A0A075B652 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-4A0A075B652 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav5-4A0A075B652 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Trav5-4A0A075B652 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-4A0A075B652 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.38■□□□□ 0.05
Trav5-4A0A075B652 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-4A0A075B652 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.38■□□□□ 0.05
Trav5-4A0A075B652 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Gm38205-201ENSMUST00000192243 258 ntBASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-4A0A075B652 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-4A0A075B652 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms