Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav13-1A0A075B644 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-1A0A075B644 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13-1A0A075B644 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13-1A0A075B644 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav13-1A0A075B644 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Gm6211-202ENSMUST00000167849 925 ntBASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav13-1A0A075B644 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms