Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9n-4A0A075B631 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9n-4A0A075B631 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav9n-4A0A075B631 Gm40848-201ENSMUST00000221998 324 ntBASIC12.63□□□□□ -0.39
Trav9n-4A0A075B631 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.63□□□□□ -0.39
Trav9n-4A0A075B631 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9n-4A0A075B631 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9n-4A0A075B631 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9n-4A0A075B631 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Gm27454-201ENSMUST00000185090 204 ntBASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-4A0A075B631 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Gm26833-201ENSMUST00000180899 440 ntBASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-4A0A075B631 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-4A0A075B631 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Fam105a-203ENSMUST00000226170 3043 ntBASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Gm45417-201ENSMUST00000209533 758 ntBASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms