Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav13d-1A0A075B606 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.51□□□□□ -0.25
Trav13d-1A0A075B606 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav13d-1A0A075B606 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-1A0A075B606 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-1A0A075B606 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-1A0A075B606 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-1A0A075B606 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav13d-1A0A075B606 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-1A0A075B606 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Gm12441-201ENSMUST00000121806 588 ntBASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Gm6211-202ENSMUST00000167849 925 ntBASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Trav13d-1A0A075B606 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms