Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-1A0A075B601 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-1A0A075B601 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-1A0A075B601 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9-1A0A075B601 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Gm43060-201ENSMUST00000200621 289 ntBASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms