Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm37530-201ENSMUST00000191759 4932 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm25396-201ENSMUST00000103981 133 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm13352-201ENSMUST00000117515 262 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm11893-201ENSMUST00000117829 491 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm14480-201ENSMUST00000118521 433 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm13552-201ENSMUST00000118837 417 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm22687-201ENSMUST00000158301 105 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm23187-201ENSMUST00000175746 86 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm20690-201ENSMUST00000177341 315 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm28142-201ENSMUST00000186899 698 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm37293-201ENSMUST00000191658 295 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm42804-201ENSMUST00000199701 178 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm20136-201ENSMUST00000207501 891 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm8489-201ENSMUST00000209876 1152 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 AC099629.1-201ENSMUST00000226778 464 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 CT009550.2-201ENSMUST00000228851 399 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC8.68□□□□□ -1.02
Vps53Q8CCB4 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Mir669e-201ENSMUST00000117003 119 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm15074-201ENSMUST00000117603 936 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm12844-201ENSMUST00000119463 582 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm24782-201ENSMUST00000157641 132 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm8715-201ENSMUST00000162728 531 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm17149-201ENSMUST00000164712 375 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm22702-201ENSMUST00000175372 69 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm38203-201ENSMUST00000191815 245 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Ighv1-73-201ENSMUST00000197435 352 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm21054-201ENSMUST00000203981 380 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 AC114573.1-201ENSMUST00000224120 1210 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 AC133598.4-201ENSMUST00000224577 454 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm26226-201ENSMUST00000082509 116 ntBASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms