Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC8.09□□□□□ -1.11
Tpm1P58771 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Tpm1P58771 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Tpm1P58771 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.09□□□□□ -1.11
Tpm1P58771 Mir1968-201ENSMUST00000157429 68 ntBASIC8.09□□□□□ -1.11
Tpm1P58771 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Tpm1P58771 Gm5251-201ENSMUST00000188959 472 ntBASIC8.09□□□□□ -1.11
Tpm1P58771 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.09□□□□□ -1.11
Tpm1P58771 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC8.09□□□□□ -1.11
Tpm1P58771 Gm5541-201ENSMUST00000193248 1113 ntBASIC8.09□□□□□ -1.11
Tpm1P58771 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.09□□□□□ -1.11
Tpm1P58771 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC8.09□□□□□ -1.11
Tpm1P58771 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Tpm1P58771 Gm43212-201ENSMUST00000198208 394 ntBASIC8.09□□□□□ -1.11
Tpm1P58771 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC8.09□□□□□ -1.11
Tpm1P58771 Gm45795-201ENSMUST00000211847 400 ntBASIC8.09□□□□□ -1.11
Tpm1P58771 AC151904.2-201ENSMUST00000218683 1177 ntBASIC8.09□□□□□ -1.11
Tpm1P58771 Gm21321-201ENSMUST00000220179 446 ntBASIC8.09□□□□□ -1.11
Tpm1P58771 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Tpm1P58771 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Tpm1P58771 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Tpm1P58771 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Tpm1P58771 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Tpm1P58771 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Tpm1P58771 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Tpm1P58771 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.11
Tpm1P58771 Gm26831-201ENSMUST00000181458 1380 ntBASIC8.09□□□□□ -1.12
Tpm1P58771 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Tpm1P58771 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Tpm1P58771 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Tpm1P58771 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.08□□□□□ -1.12
Tpm1P58771 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Tpm1P58771 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Tpm1P58771 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Tpm1P58771 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Tpm1P58771 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Tpm1P58771 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Tpm1P58771 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Tpm1P58771 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC8.08□□□□□ -1.12
Tpm1P58771 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Tpm1P58771 Gm12710-201ENSMUST00000119011 216 ntBASIC8.08□□□□□ -1.12
Tpm1P58771 Gm11901-201ENSMUST00000120412 437 ntBASIC8.08□□□□□ -1.12
Tpm1P58771 Gm12967-201ENSMUST00000122147 289 ntBASIC8.08□□□□□ -1.12
Tpm1P58771 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC8.08□□□□□ -1.12
Tpm1P58771 Gm26070-201ENSMUST00000157500 137 ntBASIC8.08□□□□□ -1.12
Tpm1P58771 Gm7211-201ENSMUST00000172692 1118 ntBASIC8.08□□□□□ -1.12
Tpm1P58771 Gm26269-201ENSMUST00000180144 126 ntBASIC8.08□□□□□ -1.12
Tpm1P58771 Mir6912-201ENSMUST00000184456 70 ntBASIC8.08□□□□□ -1.12
Tpm1P58771 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Tpm1P58771 Gm27972-201ENSMUST00000184720 137 ntBASIC8.08□□□□□ -1.12
Tpm1P58771 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC8.08□□□□□ -1.12
Tpm1P58771 Gm43815-201ENSMUST00000197676 990 ntBASIC8.08□□□□□ -1.12
Tpm1P58771 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Tpm1P58771 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Tpm1P58771 Gm18629-201ENSMUST00000222496 884 ntBASIC8.08□□□□□ -1.12
Tpm1P58771 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Tpm1P58771 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Tpm1P58771 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Tpm1P58771 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Tpm1P58771 Gm44141-201ENSMUST00000204231 1583 ntBASIC8.08□□□□□ -1.12
Tpm1P58771 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Tpm1P58771 Gm15930-201ENSMUST00000156603 2037 ntBASIC8.08□□□□□ -1.12
Tpm1P58771 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Tpm1P58771 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Tpm1P58771 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Tpm1P58771 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Tpm1P58771 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Tpm1P58771 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Tpm1P58771 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
Tpm1P58771 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Tpm1P58771 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Tpm1P58771 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Tpm1P58771 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC8.07□□□□□ -1.12
Tpm1P58771 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Tpm1P58771 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.07□□□□□ -1.12
Tpm1P58771 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Tpm1P58771 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Tpm1P58771 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Tpm1P58771 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Tpm1P58771 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Tpm1P58771 Gm36981-201ENSMUST00000192340 4485 ntBASIC8.07□□□□□ -1.12
Tpm1P58771 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Tpm1P58771 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Tpm1P58771 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Tpm1P58771 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Tpm1P58771 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC8.07□□□□□ -1.12
Tpm1P58771 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.07□□□□□ -1.12
Tpm1P58771 Gm16056-201ENSMUST00000119293 135 ntBASIC8.07□□□□□ -1.12
Tpm1P58771 Gm12464-201ENSMUST00000121385 1016 ntBASIC8.07□□□□□ -1.12
Tpm1P58771 Gm11933-201ENSMUST00000121550 375 ntBASIC8.07□□□□□ -1.12
Tpm1P58771 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Tpm1P58771 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Tpm1P58771 Gm5445-201ENSMUST00000180224 480 ntBASIC8.07□□□□□ -1.12
Tpm1P58771 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Tpm1P58771 Gm37469-201ENSMUST00000193728 890 ntBASIC8.07□□□□□ -1.12
Tpm1P58771 Gm37108-201ENSMUST00000194605 626 ntBASIC8.07□□□□□ -1.12
Tpm1P58771 Gm5857-201ENSMUST00000198953 493 ntBASIC8.07□□□□□ -1.12
Tpm1P58771 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Tpm1P58771 Gm5154-201ENSMUST00000203971 399 ntBASIC8.07□□□□□ -1.12
Tpm1P58771 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms