Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm25498-201ENSMUST00000104424 129 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm16221-201ENSMUST00000117331 393 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm15164-201ENSMUST00000122203 271 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm2735-201ENSMUST00000136133 277 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm17212-201ENSMUST00000166666 259 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm25690-201ENSMUST00000175439 77 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm28416-201ENSMUST00000188334 292 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm18799-201ENSMUST00000189104 913 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm38226-201ENSMUST00000192207 521 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm37177-201ENSMUST00000193768 417 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm43377-201ENSMUST00000201640 455 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm18562-201ENSMUST00000209949 915 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm10764-202ENSMUST00000220397 2335 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Gm18631-201ENSMUST00000223125 1043 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.65□□□□□ -1.18
Cxcl12P40224 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Cxcl12P40224 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Cxcl12P40224 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Cxcl12P40224 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC7.65□□□□□ -1.19
Cxcl12P40224 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Cxcl12P40224 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Cxcl12P40224 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Cxcl12P40224 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.64□□□□□ -1.19
Cxcl12P40224 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Cxcl12P40224 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Ces2b-201ENSMUST00000059449 3408 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm5402-201ENSMUST00000119588 1618 ntBASIC7.64□□□□□ -1.19
Cxcl12P40224 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.64□□□□□ -1.19
Cxcl12P40224 Stxbp5l-205ENSMUST00000114782 3996 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Cxcl12P40224 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm22927-201ENSMUST00000104268 131 ntBASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm12468-201ENSMUST00000116189 404 ntBASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm14891-201ENSMUST00000117378 596 ntBASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm11434-201ENSMUST00000122379 629 ntBASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.64□□□□□ -1.19
Cxcl12P40224 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.64□□□□□ -1.19
Cxcl12P40224 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm9286-201ENSMUST00000173586 508 ntBASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm20702-201ENSMUST00000176181 460 ntBASIC7.64□□□□□ -1.19
Cxcl12P40224 Gm26784-201ENSMUST00000181666 410 ntBASIC7.64□□□□□ -1.19
Cxcl12P40224 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Cxcl12P40224 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC7.64□□□□□ -1.19
Cxcl12P40224 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms