Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clrn2B2RVW2 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clrn2B2RVW2 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Clrn2B2RVW2 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clrn2B2RVW2 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 CT010505.3-201ENSMUST00000227835 1651 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm25877-201ENSMUST00000104326 129 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm24057-201ENSMUST00000158616 302 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm17022-201ENSMUST00000166415 922 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm5261-201ENSMUST00000185860 713 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm4870-201ENSMUST00000198525 1251 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm44227-201ENSMUST00000203576 241 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm43926-201ENSMUST00000203978 430 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm44971-201ENSMUST00000206192 337 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 CT025685.1-201ENSMUST00000213716 150 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 AC069561.1-201ENSMUST00000213750 424 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 AC155709.1-201ENSMUST00000218794 162 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm18955-201ENSMUST00000223173 649 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 AC159205.7-201ENSMUST00000225988 692 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 AC116596.2-203ENSMUST00000227345 731 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm43609-201ENSMUST00000199084 2712 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 AC158605.4-201ENSMUST00000219013 3361 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.53□□□□□ -1.04
Clrn2B2RVW2 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC8.52□□□□□ -1.04
Clrn2B2RVW2 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
Clrn2B2RVW2 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.52□□□□□ -1.04
Clrn2B2RVW2 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Gm43890-201ENSMUST00000203437 2799 ntBASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Gm38315-201ENSMUST00000194286 2437 ntBASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Gm5843-201ENSMUST00000121631 476 ntBASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Gm27360-201ENSMUST00000183487 80 ntBASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Gm37620-201ENSMUST00000192910 501 ntBASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Gm43063-201ENSMUST00000198198 1081 ntBASIC8.52□□□□□ -1.05
Clrn2B2RVW2 AC099934.1-201ENSMUST00000200493 79 ntBASIC8.52□□□□□ -1.05
Clrn2B2RVW2 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.52□□□□□ -1.05
Clrn2B2RVW2 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Gm42969-201ENSMUST00000199858 3631 ntBASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Gm9585-201ENSMUST00000219681 1404 ntBASIC8.52□□□□□ -1.05
Clrn2B2RVW2 AC154522.1-201ENSMUST00000224647 1903 ntBASIC8.52□□□□□ -1.05
Clrn2B2RVW2 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms