Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm15576-201ENSMUST00000117806 583 ntBASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm15160-201ENSMUST00000120553 907 ntBASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm14380-201ENSMUST00000122298 431 ntBASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm24011-201ENSMUST00000157732 268 ntBASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm6610-201ENSMUST00000186324 358 ntBASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.67□□□□□ -1.02
Ccdc47Q9D024 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm43226-201ENSMUST00000202438 259 ntBASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm18690-201ENSMUST00000204488 985 ntBASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm18469-201ENSMUST00000208850 439 ntBASIC8.67□□□□□ -1.02
Ccdc47Q9D024 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm4270-201ENSMUST00000209666 406 ntBASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm7562-201ENSMUST00000210502 2537 ntBASIC8.67□□□□□ -1.02
Ccdc47Q9D024 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 AC166822.1-201ENSMUST00000227667 636 ntBASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc47Q9D024 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm6350-201ENSMUST00000195099 1339 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm25725-201ENSMUST00000104528 130 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm11810-201ENSMUST00000118311 333 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm23079-201ENSMUST00000157847 117 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm7393-201ENSMUST00000172650 739 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm20111-201ENSMUST00000184830 319 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm45432-201ENSMUST00000210391 416 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm8616-201ENSMUST00000222175 1037 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 AC146596.1-201ENSMUST00000223507 223 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm37520-201ENSMUST00000194883 2672 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Dennd6a-203ENSMUST00000224111 2692 ntBASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Ccdc47Q9D024 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm6490-201ENSMUST00000111862 461 ntBASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms